Description: Hidden Markov ProcessesTheory and Applications to Biology Author(s): M. Vidyasagar Format: Hardback Publisher: Princeton University Press, United States Imprint: Princeton University Press ISBN-13: 9780691133157, 978-0691133157 Synopsis This book explores important aspects of Markov and hidden Markov processes and the applications of these ideas to various problems in computational biology. The book starts from first principles, so that no previous knowledge of probability is necessary. However, the work is rigorous and mathematical, making it useful to engineers and mathematicians, even those not interested in biological applications. A range of exercises is provided, including drills to familiarize the reader with concepts and more advanced problems that require deep thinking about the theory. Biological applications are taken from post-genomic biology, especially genomics and proteomics. The topics examined include standard material such as the Perron-Frobenius theorem, transient and recurrent states, hitting probabilities and hitting times, maximum likelihood estimation, the Viterbi algorithm, and the Baum-Welch algorithm. The book contains discussions of extremely useful topics not usually seen at the basic level, such as ergodicity of Markov processes, Markov Chain Monte Carlo (MCMC), information theory, and large deviation theory for both [url] and Markov processes. The book also presents state-of-the-art realization theory for hidden Markov models. Among biological applications, it offers an in-depth look at the BLAST (Basic Local Alignment Search Technique) algorithm, including a comprehensive explanation of the underlying theory. Other applications such as profile hidden Markov models are also explored.
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Book Title: Hidden Markov Processes
Number of Pages: 312 Pages
Publication Name: Hidden Markov Processes: Theory and Applications to Biology
Language: English
Publisher: Princeton University Press
Item Height: 235 mm
Subject: Biology, Mathematics, Teaching
Publication Year: 2014
Type: Textbook
Item Weight: 567 g
Author: M. Vidyasagar
Item Width: 152 mm
Series: Princeton Series in Applied Mathematics
Format: Hardcover